Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNTAP49354 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNTAP49354 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FNTAP49354 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNTAP49354 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNTAP49354 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.22■□□□□ 0.67
FNTAP49354 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 AC134043.2-201ENST00000624206 2238 ntBASIC19.21■□□□□ 0.67
FNTAP49354 AL109659.2-201ENST00000606809 1674 ntBASIC19.21■□□□□ 0.67
FNTAP49354 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.21■□□□□ 0.67
FNTAP49354 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
FNTAP49354 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FNTAP49354 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
FNTAP49354 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.21■□□□□ 0.67
FNTAP49354 CKBP1-201ENST00000565489 1086 ntBASIC19.21■□□□□ 0.67
FNTAP49354 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FNTAP49354 AC110285.5-201ENST00000611501 352 ntBASIC19.21■□□□□ 0.67
FNTAP49354 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 SIRPAP1-201ENST00000448467 1770 ntBASIC19.21■□□□□ 0.67
FNTAP49354 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNTAP49354 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FNTAP49354 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.2■□□□□ 0.66
FNTAP49354 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FNTAP49354 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.2■□□□□ 0.66
FNTAP49354 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.2■□□□□ 0.66
FNTAP49354 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FNTAP49354 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FNTAP49354 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.2■□□□□ 0.66
FNTAP49354 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.2■□□□□ 0.66
FNTAP49354 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 AL355802.2-201ENST00000402069 882 ntBASIC19.2■□□□□ 0.66
FNTAP49354 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
FNTAP49354 KSR1P1-201ENST00000446298 240 ntBASIC19.2■□□□□ 0.66
FNTAP49354 RNA5SP413-201ENST00000516373 109 ntBASIC19.2■□□□□ 0.66
FNTAP49354 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.2■□□□□ 0.66
FNTAP49354 AC026271.3-201ENST00000571884 352 ntBASIC19.2■□□□□ 0.66
FNTAP49354 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.2■□□□□ 0.66
FNTAP49354 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
FNTAP49354 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNTAP49354 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
FNTAP49354 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 REXO1L9P-201ENST00000604264 2108 ntBASIC19.19■□□□□ 0.66
FNTAP49354 LINC00896-202ENST00000609602 2128 ntBASIC19.19■□□□□ 0.66
FNTAP49354 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.19■□□□□ 0.66
FNTAP49354 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
FNTAP49354 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.19■□□□□ 0.66
FNTAP49354 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.19■□□□□ 0.66
FNTAP49354 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
FNTAP49354 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
FNTAP49354 FLJ13224-201ENST00000313737 1514 ntBASIC19.19■□□□□ 0.66
FNTAP49354 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
FNTAP49354 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.19■□□□□ 0.66
FNTAP49354 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNTAP49354 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms