Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SLC6A12P48065 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A12P48065 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A12P48065 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.83■□□□□ 0.45
SLC6A12P48065 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A12P48065 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.83■□□□□ 0.45
SLC6A12P48065 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SLC6A12P48065 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 ECEL1P3-201ENST00000427961 737 ntBASIC17.83■□□□□ 0.44
SLC6A12P48065 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC6A12P48065 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.83■□□□□ 0.44
SLC6A12P48065 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC6A12P48065 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 AC010240.3-201ENST00000607688 395 ntBASIC17.83■□□□□ 0.44
SLC6A12P48065 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SLC6A12P48065 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 AC099343.3-201ENST00000605834 2503 ntBASIC17.83■□□□□ 0.44
SLC6A12P48065 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.83■□□□□ 0.44
SLC6A12P48065 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SLC6A12P48065 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC6A12P48065 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A12P48065 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A12P48065 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC6A12P48065 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A12P48065 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A12P48065 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A12P48065 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.81■□□□□ 0.44
SLC6A12P48065 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A12P48065 AC009065.1-201ENST00000564055 1225 ntBASIC17.81■□□□□ 0.44
SLC6A12P48065 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC6A12P48065 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC6A12P48065 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A12P48065 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms