Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NOTCH1P46531 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NOTCH1P46531 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.69□□□□□ -0.22
NOTCH1P46531 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NOTCH1P46531 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NOTCH1P46531 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.69□□□□□ -0.22
NOTCH1P46531 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.69□□□□□ -0.22
NOTCH1P46531 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 AC254562.1-201ENST00000417586 456 ntBASIC13.69□□□□□ -0.22
NOTCH1P46531 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.69□□□□□ -0.22
NOTCH1P46531 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.69□□□□□ -0.22
NOTCH1P46531 SNHG9-202ENST00000564014 471 ntBASIC13.69□□□□□ -0.22
NOTCH1P46531 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.69□□□□□ -0.22
NOTCH1P46531 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.69□□□□□ -0.22
NOTCH1P46531 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NOTCH1P46531 AL356309.3-201ENST00000624132 1934 ntBASIC13.69□□□□□ -0.22
NOTCH1P46531 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NOTCH1P46531 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.68□□□□□ -0.22
NOTCH1P46531 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.68□□□□□ -0.22
NOTCH1P46531 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 RPS2P28-201ENST00000314255 741 ntBASIC13.68□□□□□ -0.22
NOTCH1P46531 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.68□□□□□ -0.22
NOTCH1P46531 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.68□□□□□ -0.22
NOTCH1P46531 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.68□□□□□ -0.22
NOTCH1P46531 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.68□□□□□ -0.22
NOTCH1P46531 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.68□□□□□ -0.22
NOTCH1P46531 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NOTCH1P46531 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NOTCH1P46531 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.68□□□□□ -0.22
NOTCH1P46531 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.68□□□□□ -0.22
NOTCH1P46531 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
NOTCH1P46531 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.68□□□□□ -0.22
NOTCH1P46531 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.68□□□□□ -0.22
NOTCH1P46531 AC093028.1-201ENST00000622998 982 ntBASIC13.68□□□□□ -0.22
NOTCH1P46531 AL139288.1-201ENST00000623748 933 ntBASIC13.68□□□□□ -0.22
NOTCH1P46531 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NOTCH1P46531 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NOTCH1P46531 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.67□□□□□ -0.22
NOTCH1P46531 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
NOTCH1P46531 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.67□□□□□ -0.22
NOTCH1P46531 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 AC105339.3-201ENST00000560043 636 ntBASIC13.67□□□□□ -0.22
NOTCH1P46531 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.67□□□□□ -0.22
NOTCH1P46531 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NOTCH1P46531 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NOTCH1P46531 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.67□□□□□ -0.22
NOTCH1P46531 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.67□□□□□ -0.22
NOTCH1P46531 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.67□□□□□ -0.22
NOTCH1P46531 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.67□□□□□ -0.22
NOTCH1P46531 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NOTCH1P46531 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.66□□□□□ -0.22
NOTCH1P46531 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NOTCH1P46531 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 AC099778.1-201ENST00000568593 1911 ntBASIC13.66□□□□□ -0.22
NOTCH1P46531 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NOTCH1P46531 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.66□□□□□ -0.22
NOTCH1P46531 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.66□□□□□ -0.22
NOTCH1P46531 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.66□□□□□ -0.22
NOTCH1P46531 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NOTCH1P46531 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.66□□□□□ -0.22
NOTCH1P46531 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.66□□□□□ -0.22
NOTCH1P46531 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms