Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 BX088651.1-201ENST00000540551 451 ntBASIC19.23■□□□□ 0.67
MMP13P45452 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP13P45452 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MMP13P45452 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MMP13P45452 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP13P45452 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP13P45452 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP13P45452 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MMP13P45452 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.22■□□□□ 0.67
MMP13P45452 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.22■□□□□ 0.67
MMP13P45452 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
MMP13P45452 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MMP13P45452 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MMP13P45452 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
MMP13P45452 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP13P45452 C2orf69P3-201ENST00000565542 1120 ntBASIC19.22■□□□□ 0.67
MMP13P45452 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.22■□□□□ 0.67
MMP13P45452 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MMP13P45452 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.22■□□□□ 0.67
MMP13P45452 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MMP13P45452 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MMP13P45452 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MMP13P45452 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP13P45452 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP13P45452 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP13P45452 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MMP13P45452 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
MMP13P45452 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MMP13P45452 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.21■□□□□ 0.67
MMP13P45452 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MMP13P45452 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP13P45452 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MMP13P45452 KRT8P9-201ENST00000558927 1449 ntBASIC19.21■□□□□ 0.67
MMP13P45452 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MMP13P45452 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP13P45452 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP13P45452 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MMP13P45452 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP13P45452 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MMP13P45452 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MMP13P45452 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP13P45452 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP13P45452 SLC25A1P2-201ENST00000430693 912 ntBASIC19.2■□□□□ 0.66
MMP13P45452 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP13P45452 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP13P45452 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.2■□□□□ 0.66
MMP13P45452 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MMP13P45452 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP13P45452 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MMP13P45452 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms