Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC1A2P43004 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC1A2P43004 NOC2LP2-201ENST00000407594 1944 ntBASIC18.43■□□□□ 0.54
SLC1A2P43004 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC1A2P43004 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.43■□□□□ 0.54
SLC1A2P43004 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC1A2P43004 AC092338.2-201ENST00000568827 1415 ntBASIC18.43■□□□□ 0.54
SLC1A2P43004 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
SLC1A2P43004 TSPY17P-201ENST00000450329 467 ntBASIC18.43■□□□□ 0.54
SLC1A2P43004 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC1A2P43004 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC1A2P43004 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC1A2P43004 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC1A2P43004 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC1A2P43004 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC1A2P43004 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC1A2P43004 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.43■□□□□ 0.54
SLC1A2P43004 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC1A2P43004 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC1A2P43004 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC1A2P43004 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC1A2P43004 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC1A2P43004 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC1A2P43004 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC1A2P43004 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC1A2P43004 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC1A2P43004 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC1A2P43004 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC1A2P43004 CR769767.2-201ENST00000622735 460 ntBASIC18.42■□□□□ 0.54
SLC1A2P43004 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC1A2P43004 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC1A2P43004 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC1A2P43004 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC1A2P43004 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC1A2P43004 AC005332.8-201ENST00000622750 2735 ntBASIC18.41■□□□□ 0.54
SLC1A2P43004 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC1A2P43004 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SLC1A2P43004 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SLC1A2P43004 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 CCR12P-201ENST00000446203 998 ntBASIC18.41■□□□□ 0.54
SLC1A2P43004 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC1A2P43004 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SLC1A2P43004 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC1A2P43004 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A2P43004 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SLC1A2P43004 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC1A2P43004 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A2P43004 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC1A2P43004 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A2P43004 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A2P43004 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC1A2P43004 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC1A2P43004 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC1A2P43004 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 AC068880.1-201ENST00000507289 2297 ntBASIC18.4■□□□□ 0.54
SLC1A2P43004 KRT17P2-201ENST00000300992 1314 ntBASIC18.4■□□□□ 0.54
SLC1A2P43004 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A2P43004 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A2P43004 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms