Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL5P42830 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CXCL5P42830 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CXCL5P42830 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CXCL5P42830 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL5P42830 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CXCL5P42830 AC026271.2-201ENST00000428091 497 ntBASIC12.48□□□□□ -0.41
CXCL5P42830 AC006970.2-201ENST00000450065 779 ntBASIC12.48□□□□□ -0.41
CXCL5P42830 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.48□□□□□ -0.41
CXCL5P42830 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL5P42830 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.48□□□□□ -0.41
CXCL5P42830 C1QL1P1-201ENST00000568105 661 ntBASIC12.48□□□□□ -0.41
CXCL5P42830 AC022517.1-201ENST00000592429 346 ntBASIC12.48□□□□□ -0.41
CXCL5P42830 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.48□□□□□ -0.41
CXCL5P42830 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.48□□□□□ -0.41
CXCL5P42830 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL5P42830 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL5P42830 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL5P42830 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CXCL5P42830 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL5P42830 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
CXCL5P42830 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.47□□□□□ -0.41
CXCL5P42830 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL5P42830 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 SOX15-203ENST00000570788 1093 ntBASIC12.47□□□□□ -0.41
CXCL5P42830 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL5P42830 AL137784.2-201ENST00000607332 1000 ntBASIC12.47□□□□□ -0.41
CXCL5P42830 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CXCL5P42830 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.47□□□□□ -0.41
CXCL5P42830 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 RCC2P6-201ENST00000526625 1557 ntBASIC12.47□□□□□ -0.41
CXCL5P42830 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CXCL5P42830 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL5P42830 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CXCL5P42830 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL5P42830 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL5P42830 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CXCL5P42830 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL5P42830 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CXCL5P42830 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms