Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX6P35712 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.58■□□□□ 0.25
SOX6P35712 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SOX6P35712 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.58■□□□□ 0.25
SOX6P35712 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.58■□□□□ 0.25
SOX6P35712 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX6P35712 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
SOX6P35712 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX6P35712 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.58■□□□□ 0.25
SOX6P35712 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX6P35712 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 AC006015.1-201ENST00000429970 570 ntBASIC16.58■□□□□ 0.24
SOX6P35712 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.58■□□□□ 0.24
SOX6P35712 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SOX6P35712 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.58■□□□□ 0.24
SOX6P35712 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.58■□□□□ 0.24
SOX6P35712 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.58■□□□□ 0.24
SOX6P35712 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.58■□□□□ 0.24
SOX6P35712 MYC-208ENST00000641036 567 ntBASIC16.58■□□□□ 0.24
SOX6P35712 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
SOX6P35712 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.58■□□□□ 0.24
SOX6P35712 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SOX6P35712 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX6P35712 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
SOX6P35712 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SOX6P35712 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX6P35712 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SOX6P35712 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 AC093677.2-201ENST00000600169 1863 ntBASIC16.57■□□□□ 0.24
SOX6P35712 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SOX6P35712 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SOX6P35712 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SOX6P35712 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX6P35712 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX6P35712 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.57■□□□□ 0.24
SOX6P35712 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX6P35712 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX6P35712 AC092666.2-201ENST00000613287 246 ntBASIC16.57■□□□□ 0.24
SOX6P35712 BID-214ENST00000617586 542 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX6P35712 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX6P35712 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SOX6P35712 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX6P35712 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.57■□□□□ 0.24
SOX6P35712 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX6P35712 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SOX6P35712 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SOX6P35712 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms