Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
HOXA13P31271 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HOXA13P31271 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
HOXA13P31271 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
HOXA13P31271 ATP5G2P1-201ENST00000433580 426 ntBASIC21.01■□□□□ 0.95
HOXA13P31271 AC009065.1-201ENST00000564055 1225 ntBASIC21.01■□□□□ 0.95
HOXA13P31271 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXA13P31271 AC112777.1-201ENST00000540175 1423 ntBASIC21.01■□□□□ 0.95
HOXA13P31271 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXA13P31271 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA13P31271 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
HOXA13P31271 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA13P31271 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21■□□□□ 0.95
HOXA13P31271 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA13P31271 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21■□□□□ 0.95
HOXA13P31271 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21■□□□□ 0.95
HOXA13P31271 KRT18P48-201ENST00000434763 852 ntBASIC21■□□□□ 0.95
HOXA13P31271 AP002383.4-201ENST00000442518 975 ntBASIC21■□□□□ 0.95
HOXA13P31271 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21■□□□□ 0.95
HOXA13P31271 KRT8P26-201ENST00000534154 1276 ntBASIC21■□□□□ 0.95
HOXA13P31271 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21■□□□□ 0.95
HOXA13P31271 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA13P31271 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21■□□□□ 0.95
HOXA13P31271 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21■□□□□ 0.95
HOXA13P31271 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA13P31271 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HOXA13P31271 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21■□□□□ 0.95
HOXA13P31271 SDHAP2-201ENST00000455183 2001 ntBASIC21■□□□□ 0.95
HOXA13P31271 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA13P31271 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21■□□□□ 0.95
HOXA13P31271 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21■□□□□ 0.95
HOXA13P31271 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXA13P31271 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HOXA13P31271 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA13P31271 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HOXA13P31271 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
HOXA13P31271 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 MIR149-201ENST00000384879 89 ntBASIC20.99■□□□□ 0.95
HOXA13P31271 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXA13P31271 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXA13P31271 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.99■□□□□ 0.95
HOXA13P31271 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXA13P31271 AC024563.2-201ENST00000603282 481 ntBASIC20.99■□□□□ 0.95
HOXA13P31271 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA13P31271 CROCCP3-202ENST00000420820 1947 ntBASIC20.99■□□□□ 0.95
HOXA13P31271 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA13P31271 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 AC009102.3-201ENST00000623118 1491 ntBASIC20.99■□□□□ 0.95
HOXA13P31271 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA13P31271 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA13P31271 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXA13P31271 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA13P31271 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA13P31271 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
HOXA13P31271 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXA13P31271 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXA13P31271 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.98■□□□□ 0.95
HOXA13P31271 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXA13P31271 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HOXA13P31271 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 AC098818.2-201ENST00000564925 2320 ntBASIC20.98■□□□□ 0.95
HOXA13P31271 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA13P31271 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA13P31271 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HOXA13P31271 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXA13P31271 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA13P31271 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA13P31271 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HOXA13P31271 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HOXA13P31271 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA13P31271 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA13P31271 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HOXA13P31271 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXA13P31271 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
HOXA13P31271 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
HOXA13P31271 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms