Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.36■□□□□ 0.53
GABRB3P28472 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
GABRB3P28472 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.36■□□□□ 0.53
GABRB3P28472 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 SNORA78-201ENST00000459373 127 ntBASIC18.36■□□□□ 0.53
GABRB3P28472 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.36■□□□□ 0.53
GABRB3P28472 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 AL355075.4-201ENST00000554988 638 ntBASIC18.36■□□□□ 0.53
GABRB3P28472 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB3P28472 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GABRB3P28472 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
GABRB3P28472 CR769767.2-201ENST00000622735 460 ntBASIC18.36■□□□□ 0.53
GABRB3P28472 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GABRB3P28472 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB3P28472 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
GABRB3P28472 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GABRB3P28472 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GABRB3P28472 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GABRB3P28472 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRB3P28472 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.35■□□□□ 0.53
GABRB3P28472 AL163051.1-201ENST00000569214 1512 ntBASIC18.35■□□□□ 0.53
GABRB3P28472 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.35■□□□□ 0.53
GABRB3P28472 TSPY17P-201ENST00000450329 467 ntBASIC18.35■□□□□ 0.53
GABRB3P28472 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GABRB3P28472 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GABRB3P28472 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB3P28472 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRB3P28472 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB3P28472 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GABRB3P28472 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 INGX-201ENST00000359239 846 ntBASIC18.34■□□□□ 0.53
GABRB3P28472 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 MIR1238-201ENST00000408483 83 ntBASIC18.34■□□□□ 0.53
GABRB3P28472 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB3P28472 AC007663.1-201ENST00000438948 1240 ntBASIC18.34■□□□□ 0.53
GABRB3P28472 WWOX-216ENST00000569818 525 ntBASIC18.34■□□□□ 0.53
GABRB3P28472 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms