Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.98■■□□□ 1.11
NCLP19338 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCLP19338 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NCLP19338 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
NCLP19338 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
NCLP19338 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.97■■□□□ 1.11
NCLP19338 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 RPS2P4-201ENST00000476944 856 ntBASIC21.97■■□□□ 1.11
NCLP19338 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.97■■□□□ 1.11
NCLP19338 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NCLP19338 AL121829.2-201ENST00000620908 328 ntBASIC21.97■■□□□ 1.11
NCLP19338 AC083906.6-201ENST00000641366 219 ntBASIC21.97■■□□□ 1.11
NCLP19338 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
NCLP19338 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.97■■□□□ 1.11
NCLP19338 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLP19338 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLP19338 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.96■■□□□ 1.11
NCLP19338 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.96■■□□□ 1.11
NCLP19338 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NCLP19338 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.96■■□□□ 1.11
NCLP19338 AC008550.1-201ENST00000511500 884 ntBASIC21.96■■□□□ 1.11
NCLP19338 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 AC126763.1-201ENST00000552015 2118 ntBASIC21.96■■□□□ 1.11
NCLP19338 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.96■■□□□ 1.11
NCLP19338 MTDHP1-201ENST00000605323 784 ntBASIC21.96■■□□□ 1.11
NCLP19338 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NCLP19338 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.96■■□□□ 1.11
NCLP19338 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NCLP19338 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
NCLP19338 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
NCLP19338 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLP19338 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NCLP19338 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
NCLP19338 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
NCLP19338 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
NCLP19338 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.95■■□□□ 1.1
NCLP19338 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
NCLP19338 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.95■■□□□ 1.1
NCLP19338 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.95■■□□□ 1.1
NCLP19338 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.95■■□□□ 1.1
NCLP19338 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLP19338 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NCLP19338 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NCLP19338 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NCLP19338 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
NCLP19338 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.94■■□□□ 1.1
NCLP19338 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.94■■□□□ 1.1
NCLP19338 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms