Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 MIR3180-1-201ENST00000580374 94 ntBASIC20.26■□□□□ 0.83
ATF7P17544 MIR3180-3-201ENST00000584616 94 ntBASIC20.26■□□□□ 0.83
ATF7P17544 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 AC004408.2-201ENST00000623613 2777 ntBASIC20.26■□□□□ 0.83
ATF7P17544 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.26■□□□□ 0.83
ATF7P17544 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATF7P17544 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.25■□□□□ 0.83
ATF7P17544 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF7P17544 HCG11-201ENST00000411553 5696 ntBASIC20.25■□□□□ 0.83
ATF7P17544 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF7P17544 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATF7P17544 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF7P17544 AP002383.4-201ENST00000442518 975 ntBASIC20.25■□□□□ 0.83
ATF7P17544 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.25■□□□□ 0.83
ATF7P17544 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATF7P17544 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.25■□□□□ 0.83
ATF7P17544 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF7P17544 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF7P17544 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATF7P17544 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF7P17544 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATF7P17544 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATF7P17544 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ATF7P17544 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 MIR662-201ENST00000384847 95 ntBASIC20.24■□□□□ 0.83
ATF7P17544 MIR564-202ENST00000385049 94 ntBASIC20.24■□□□□ 0.83
ATF7P17544 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 TSSC2-201ENST00000450217 709 ntBASIC20.24■□□□□ 0.83
ATF7P17544 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.24■□□□□ 0.83
ATF7P17544 AC104390.1-201ENST00000555663 520 ntBASIC20.24■□□□□ 0.83
ATF7P17544 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.24■□□□□ 0.83
ATF7P17544 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.24■□□□□ 0.83
ATF7P17544 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.24■□□□□ 0.83
ATF7P17544 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.24■□□□□ 0.83
ATF7P17544 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.24■□□□□ 0.83
ATF7P17544 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATF7P17544 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATF7P17544 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF7P17544 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
ATF7P17544 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATF7P17544 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.23■□□□□ 0.83
ATF7P17544 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATF7P17544 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.23■□□□□ 0.83
ATF7P17544 KRT8P7-201ENST00000533003 1432 ntBASIC20.23■□□□□ 0.83
ATF7P17544 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.23■□□□□ 0.83
ATF7P17544 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.23■□□□□ 0.83
ATF7P17544 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 AC010240.3-201ENST00000607688 395 ntBASIC20.23■□□□□ 0.83
ATF7P17544 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATF7P17544 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF7P17544 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms