Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RARAP10276 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RARAP10276 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 KRT17P2-201ENST00000300992 1314 ntBASIC19.42■□□□□ 0.7
RARAP10276 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.42■□□□□ 0.7
RARAP10276 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RARAP10276 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RARAP10276 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 KRT8P45-201ENST00000414328 1447 ntBASIC19.42■□□□□ 0.7
RARAP10276 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.41■□□□□ 0.7
RARAP10276 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RARAP10276 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
RARAP10276 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RARAP10276 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.41■□□□□ 0.7
RARAP10276 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
RARAP10276 TSPY15P-201ENST00000457163 923 ntBASIC19.41■□□□□ 0.7
RARAP10276 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.41■□□□□ 0.7
RARAP10276 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
RARAP10276 AL023803.3-201ENST00000615559 522 ntBASIC19.41■□□□□ 0.7
RARAP10276 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RARAP10276 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.41■□□□□ 0.7
RARAP10276 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
RARAP10276 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARAP10276 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RARAP10276 AC008764.6-201ENST00000595909 2069 ntBASIC19.4■□□□□ 0.7
RARAP10276 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.4■□□□□ 0.7
RARAP10276 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RARAP10276 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RARAP10276 MIR1238-201ENST00000408483 83 ntBASIC19.4■□□□□ 0.7
RARAP10276 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 AC112777.1-201ENST00000540175 1423 ntBASIC19.4■□□□□ 0.7
RARAP10276 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.4■□□□□ 0.7
RARAP10276 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RARAP10276 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RARAP10276 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARAP10276 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.39■□□□□ 0.7
RARAP10276 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.39■□□□□ 0.7
RARAP10276 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.39■□□□□ 0.7
RARAP10276 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RARAP10276 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.39■□□□□ 0.69
RARAP10276 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RARAP10276 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.39■□□□□ 0.69
RARAP10276 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 MIR564-202ENST00000385049 94 ntBASIC19.39■□□□□ 0.69
RARAP10276 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.39■□□□□ 0.69
RARAP10276 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.39■□□□□ 0.69
RARAP10276 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.39■□□□□ 0.69
RARAP10276 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARAP10276 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.39■□□□□ 0.69
RARAP10276 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RARAP10276 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RARAP10276 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RARAP10276 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.38■□□□□ 0.69
RARAP10276 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RARAP10276 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RARAP10276 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RARAP10276 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms