Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL1A2P08123 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.23■□□□□ 0.83
COL1A2P08123 KRT17P6-201ENST00000453795 1220 ntBASIC20.23■□□□□ 0.83
COL1A2P08123 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.23■□□□□ 0.83
COL1A2P08123 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.23■□□□□ 0.83
COL1A2P08123 AL353801.3-201ENST00000609898 542 ntBASIC20.23■□□□□ 0.83
COL1A2P08123 AL121772.3-201ENST00000610840 674 ntBASIC20.23■□□□□ 0.83
COL1A2P08123 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL1A2P08123 ANO7L1-203ENST00000602586 1720 ntBASIC20.23■□□□□ 0.83
COL1A2P08123 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.23■□□□□ 0.83
COL1A2P08123 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL1A2P08123 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL1A2P08123 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL1A2P08123 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL1A2P08123 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
COL1A2P08123 AL499627.1-201ENST00000569373 2188 ntBASIC20.23■□□□□ 0.83
COL1A2P08123 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL1A2P08123 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL1A2P08123 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.22■□□□□ 0.83
COL1A2P08123 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.22■□□□□ 0.83
COL1A2P08123 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL1A2P08123 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 LINC00167-201ENST00000530583 1419 ntBASIC20.22■□□□□ 0.83
COL1A2P08123 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL1A2P08123 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
COL1A2P08123 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
COL1A2P08123 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.22■□□□□ 0.83
COL1A2P08123 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
COL1A2P08123 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 IGHV3-47-201ENST00000425060 335 ntBASIC20.21■□□□□ 0.83
COL1A2P08123 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
COL1A2P08123 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 RN7SL510P-201ENST00000581311 263 ntBASIC20.21■□□□□ 0.83
COL1A2P08123 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
COL1A2P08123 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 IFNL4P1-201ENST00000607083 540 ntBASIC20.21■□□□□ 0.83
COL1A2P08123 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.21■□□□□ 0.83
COL1A2P08123 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.21■□□□□ 0.83
COL1A2P08123 AC004870.1-201ENST00000315132 882 ntBASIC20.21■□□□□ 0.83
COL1A2P08123 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 AL845331.1-201ENST00000424978 1190 ntBASIC20.21■□□□□ 0.83
COL1A2P08123 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL1A2P08123 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL1A2P08123 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
COL1A2P08123 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.2■□□□□ 0.82
COL1A2P08123 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.2■□□□□ 0.82
COL1A2P08123 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.2■□□□□ 0.82
COL1A2P08123 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.2■□□□□ 0.82
COL1A2P08123 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.2■□□□□ 0.82
COL1A2P08123 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.2■□□□□ 0.82
COL1A2P08123 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL1A2P08123 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.2■□□□□ 0.82
COL1A2P08123 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL1A2P08123 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.2■□□□□ 0.82
COL1A2P08123 FOSL1P1-201ENST00000511041 816 ntBASIC20.2■□□□□ 0.82
COL1A2P08123 AC011840.4-201ENST00000578471 627 ntBASIC20.2■□□□□ 0.82
COL1A2P08123 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
COL1A2P08123 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.19■□□□□ 0.82
COL1A2P08123 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.19■□□□□ 0.82
COL1A2P08123 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL1A2P08123 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.19■□□□□ 0.82
COL1A2P08123 FAAHP1-202ENST00000446499 1238 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms