Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.62■□□□□ 0.57
RETP07949 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RETP07949 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.62■□□□□ 0.57
RETP07949 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RETP07949 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 AC093503.3-201ENST00000624917 2352 ntBASIC18.61■□□□□ 0.57
RETP07949 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.61■□□□□ 0.57
RETP07949 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RETP07949 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.61■□□□□ 0.57
RETP07949 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RETP07949 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RETP07949 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RETP07949 LINC00167-201ENST00000530583 1419 ntBASIC18.61■□□□□ 0.57
RETP07949 AC233702.3-201ENST00000578656 1387 ntBASIC18.61■□□□□ 0.57
RETP07949 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.61■□□□□ 0.57
RETP07949 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RETP07949 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.61■□□□□ 0.57
RETP07949 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.61■□□□□ 0.57
RETP07949 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RETP07949 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.61■□□□□ 0.57
RETP07949 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.61■□□□□ 0.57
RETP07949 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.61■□□□□ 0.57
RETP07949 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.61■□□□□ 0.57
RETP07949 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.61■□□□□ 0.57
RETP07949 REXO1L6P-202ENST00000619970 1078 ntBASIC18.61■□□□□ 0.57
RETP07949 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.61■□□□□ 0.57
RETP07949 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.61■□□□□ 0.57
RETP07949 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.6■□□□□ 0.57
RETP07949 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.6■□□□□ 0.57
RETP07949 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.6■□□□□ 0.57
RETP07949 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RETP07949 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.6■□□□□ 0.57
RETP07949 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.6■□□□□ 0.57
RETP07949 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.6■□□□□ 0.57
RETP07949 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.6■□□□□ 0.57
RETP07949 AL773604.1-201ENST00000617417 272 ntBASIC18.6■□□□□ 0.57
RETP07949 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RETP07949 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RETP07949 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.6■□□□□ 0.57
RETP07949 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RETP07949 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RETP07949 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RETP07949 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
RETP07949 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.6■□□□□ 0.57
RETP07949 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RETP07949 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.59■□□□□ 0.57
RETP07949 AL032819.2-201ENST00000624543 2162 ntBASIC18.59■□□□□ 0.57
RETP07949 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.59■□□□□ 0.57
RETP07949 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RETP07949 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.59■□□□□ 0.57
RETP07949 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RETP07949 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
RETP07949 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.59■□□□□ 0.57
RETP07949 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RETP07949 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.59■□□□□ 0.57
RETP07949 MCCD1P1-208ENST00000445732 328 ntBASIC18.59■□□□□ 0.57
RETP07949 RNA5SP419-201ENST00000515908 135 ntBASIC18.59■□□□□ 0.57
RETP07949 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.59■□□□□ 0.57
RETP07949 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RETP07949 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.59■□□□□ 0.57
RETP07949 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RETP07949 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RETP07949 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms