Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MT-ND1P03886 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 PKD1P1-201ENST00000458669 6805 ntBASIC17.45■□□□□ 0.38
MT-ND1P03886 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 HLA-L-209ENST00000420110 1011 ntBASIC17.45■□□□□ 0.38
MT-ND1P03886 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.45■□□□□ 0.38
MT-ND1P03886 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.45■□□□□ 0.38
MT-ND1P03886 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 AL160286.2-201ENST00000567150 934 ntBASIC17.45■□□□□ 0.38
MT-ND1P03886 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.45■□□□□ 0.38
MT-ND1P03886 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.45■□□□□ 0.38
MT-ND1P03886 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MT-ND1P03886 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MT-ND1P03886 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND1P03886 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND1P03886 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.45■□□□□ 0.38
MT-ND1P03886 AC138028.4-201ENST00000564984 1845 ntBASIC17.44■□□□□ 0.38
MT-ND1P03886 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MT-ND1P03886 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND1P03886 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.44■□□□□ 0.38
MT-ND1P03886 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND1P03886 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND1P03886 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND1P03886 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.44■□□□□ 0.38
MT-ND1P03886 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.44■□□□□ 0.38
MT-ND1P03886 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 OR6D1P-202ENST00000641007 5290 ntBASIC17.44■□□□□ 0.38
MT-ND1P03886 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MT-ND1P03886 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND1P03886 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND1P03886 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.44■□□□□ 0.38
MT-ND1P03886 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MT-ND1P03886 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.43■□□□□ 0.38
MT-ND1P03886 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND1P03886 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.43■□□□□ 0.38
MT-ND1P03886 AC008403.3-201ENST00000598924 454 ntBASIC17.43■□□□□ 0.38
MT-ND1P03886 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.43■□□□□ 0.38
MT-ND1P03886 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.43■□□□□ 0.38
MT-ND1P03886 HLA-A-209ENST00000638375 975 ntBASIC17.43■□□□□ 0.38
MT-ND1P03886 AC068587.9-201ENST00000641814 219 ntBASIC17.43■□□□□ 0.38
MT-ND1P03886 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MT-ND1P03886 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND1P03886 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND1P03886 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
MT-ND1P03886 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND1P03886 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MT-ND1P03886 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms