Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.72■□□□□ 0.59
USP1O94782 AC012313.1-201ENST00000593393 3059 ntBASIC18.72■□□□□ 0.59
USP1O94782 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
USP1O94782 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.72■□□□□ 0.59
USP1O94782 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 MFAP1P1-201ENST00000442257 1255 ntBASIC18.72■□□□□ 0.59
USP1O94782 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 AP001412.1-201ENST00000608405 714 ntBASIC18.72■□□□□ 0.59
USP1O94782 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
USP1O94782 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 AC068880.1-201ENST00000507289 2297 ntBASIC18.72■□□□□ 0.59
USP1O94782 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.72■□□□□ 0.59
USP1O94782 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.72■□□□□ 0.59
USP1O94782 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
USP1O94782 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
USP1O94782 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.71■□□□□ 0.59
USP1O94782 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
USP1O94782 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.71■□□□□ 0.59
USP1O94782 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.71■□□□□ 0.59
USP1O94782 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.71■□□□□ 0.59
USP1O94782 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
USP1O94782 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.71■□□□□ 0.59
USP1O94782 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.71■□□□□ 0.59
USP1O94782 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.71■□□□□ 0.59
USP1O94782 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.71■□□□□ 0.59
USP1O94782 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.71■□□□□ 0.59
USP1O94782 AC233702.5-201ENST00000584107 538 ntBASIC18.71■□□□□ 0.59
USP1O94782 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.71■□□□□ 0.59
USP1O94782 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
USP1O94782 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP1O94782 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.71■□□□□ 0.59
USP1O94782 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
USP1O94782 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
USP1O94782 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.7■□□□□ 0.58
USP1O94782 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
USP1O94782 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP1O94782 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.7■□□□□ 0.58
USP1O94782 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP1O94782 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 AL023284.2-201ENST00000405850 579 ntBASIC18.7■□□□□ 0.58
USP1O94782 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 CA15P1-201ENST00000481698 905 ntBASIC18.7■□□□□ 0.58
USP1O94782 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.7■□□□□ 0.58
USP1O94782 SLC25A1P4-201ENST00000567977 778 ntBASIC18.7■□□□□ 0.58
USP1O94782 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.7■□□□□ 0.58
USP1O94782 AC113410.3-201ENST00000623366 203 ntBASIC18.7■□□□□ 0.58
USP1O94782 AL049637.2-201ENST00000641778 930 ntBASIC18.7■□□□□ 0.58
USP1O94782 AC106820.2-201ENST00000563775 3264 ntBASIC18.7■□□□□ 0.58
USP1O94782 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
USP1O94782 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.7■□□□□ 0.58
USP1O94782 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.7■□□□□ 0.58
USP1O94782 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP1O94782 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.69■□□□□ 0.58
USP1O94782 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 NOC2LP2-201ENST00000407594 1944 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms