Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.78■□□□□ 0.6
PMPCBO75439 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.78■□□□□ 0.6
PMPCBO75439 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PMPCBO75439 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.78■□□□□ 0.6
PMPCBO75439 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.78■□□□□ 0.6
PMPCBO75439 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMPCBO75439 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.77■□□□□ 0.6
PMPCBO75439 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PMPCBO75439 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PMPCBO75439 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.77■□□□□ 0.6
PMPCBO75439 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.77■□□□□ 0.6
PMPCBO75439 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.77■□□□□ 0.6
PMPCBO75439 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMPCBO75439 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PMPCBO75439 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
PMPCBO75439 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PMPCBO75439 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PMPCBO75439 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PMPCBO75439 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
PMPCBO75439 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
PMPCBO75439 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.76■□□□□ 0.59
PMPCBO75439 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.76■□□□□ 0.59
PMPCBO75439 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.76■□□□□ 0.59
PMPCBO75439 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.76■□□□□ 0.59
PMPCBO75439 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.76■□□□□ 0.59
PMPCBO75439 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.76■□□□□ 0.59
PMPCBO75439 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.76■□□□□ 0.59
PMPCBO75439 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
PMPCBO75439 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PMPCBO75439 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.76■□□□□ 0.59
PMPCBO75439 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
PMPCBO75439 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMPCBO75439 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PMPCBO75439 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PMPCBO75439 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PMPCBO75439 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.75■□□□□ 0.59
PMPCBO75439 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.75■□□□□ 0.59
PMPCBO75439 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.75■□□□□ 0.59
PMPCBO75439 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.75■□□□□ 0.59
PMPCBO75439 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 AP000593.1-201ENST00000393668 712 ntBASIC18.75■□□□□ 0.59
PMPCBO75439 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.75■□□□□ 0.59
PMPCBO75439 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.75■□□□□ 0.59
PMPCBO75439 AC009947.2-201ENST00000444014 672 ntBASIC18.75■□□□□ 0.59
PMPCBO75439 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.75■□□□□ 0.59
PMPCBO75439 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.75■□□□□ 0.59
PMPCBO75439 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PMPCBO75439 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMPCBO75439 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMPCBO75439 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PMPCBO75439 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMPCBO75439 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PMPCBO75439 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
PMPCBO75439 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms