Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRIM13O60858 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRIM13O60858 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM13O60858 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM13O60858 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM13O60858 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM13O60858 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM13O60858 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 AL355802.2-201ENST00000402069 882 ntBASIC18.22■□□□□ 0.51
TRIM13O60858 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 KSR1P1-201ENST00000446298 240 ntBASIC18.22■□□□□ 0.51
TRIM13O60858 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM13O60858 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM13O60858 CKBP1-201ENST00000565489 1086 ntBASIC18.22■□□□□ 0.51
TRIM13O60858 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM13O60858 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM13O60858 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM13O60858 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM13O60858 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM13O60858 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM13O60858 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM13O60858 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
TRIM13O60858 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM13O60858 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM13O60858 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 RPS2P4-201ENST00000476944 856 ntBASIC18.21■□□□□ 0.51
TRIM13O60858 AP002982.1-201ENST00000492365 877 ntBASIC18.21■□□□□ 0.51
TRIM13O60858 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM13O60858 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM13O60858 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 AL109659.2-201ENST00000606809 1674 ntBASIC18.21■□□□□ 0.51
TRIM13O60858 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM13O60858 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM13O60858 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM13O60858 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 FLJ13224-201ENST00000313737 1514 ntBASIC18.2■□□□□ 0.5
TRIM13O60858 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM13O60858 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM13O60858 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM13O60858 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM13O60858 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRIM13O60858 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM13O60858 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.2■□□□□ 0.5
TRIM13O60858 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM13O60858 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM13O60858 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM13O60858 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM13O60858 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM13O60858 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM13O60858 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM13O60858 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
TRIM13O60858 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM13O60858 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms