Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.44■□□□□ 0.38
URB1O60287 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.44■□□□□ 0.38
URB1O60287 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.44■□□□□ 0.38
URB1O60287 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.44■□□□□ 0.38
URB1O60287 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
URB1O60287 AC134684.3-201ENST00000641758 218 ntBASIC17.44■□□□□ 0.38
URB1O60287 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
URB1O60287 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
URB1O60287 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
URB1O60287 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 MINOS1P3-201ENST00000457048 203 ntBASIC17.43■□□□□ 0.38
URB1O60287 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.43■□□□□ 0.38
URB1O60287 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.43■□□□□ 0.38
URB1O60287 AL049840.3-201ENST00000602669 611 ntBASIC17.43■□□□□ 0.38
URB1O60287 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
URB1O60287 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
URB1O60287 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
URB1O60287 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.42■□□□□ 0.38
URB1O60287 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.42■□□□□ 0.38
URB1O60287 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.42■□□□□ 0.38
URB1O60287 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.42■□□□□ 0.38
URB1O60287 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.42■□□□□ 0.38
URB1O60287 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.42■□□□□ 0.38
URB1O60287 DNAJB3-202ENST00000449667 1266 ntBASIC17.42■□□□□ 0.38
URB1O60287 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.42■□□□□ 0.38
URB1O60287 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.42■□□□□ 0.38
URB1O60287 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.42■□□□□ 0.38
URB1O60287 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.42■□□□□ 0.38
URB1O60287 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
URB1O60287 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.42■□□□□ 0.38
URB1O60287 HOXB1-202ENST00000577092 1414 ntBASIC17.42■□□□□ 0.38
URB1O60287 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
URB1O60287 AC116407.3-201ENST00000623905 1129 ntBASIC17.41■□□□□ 0.38
URB1O60287 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.41■□□□□ 0.38
URB1O60287 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.41■□□□□ 0.38
URB1O60287 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.41■□□□□ 0.38
URB1O60287 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.41■□□□□ 0.38
URB1O60287 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.41■□□□□ 0.38
URB1O60287 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.41■□□□□ 0.38
URB1O60287 RN7SL606P-201ENST00000472779 293 ntBASIC17.41■□□□□ 0.38
URB1O60287 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.41■□□□□ 0.38
URB1O60287 AC010240.3-201ENST00000607688 395 ntBASIC17.41■□□□□ 0.38
URB1O60287 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.41■□□□□ 0.38
URB1O60287 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.41■□□□□ 0.38
URB1O60287 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
URB1O60287 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
URB1O60287 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
URB1O60287 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
URB1O60287 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
URB1O60287 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.4■□□□□ 0.38
URB1O60287 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.4■□□□□ 0.38
URB1O60287 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
URB1O60287 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 KRT8P7-201ENST00000533003 1432 ntBASIC17.4■□□□□ 0.38
URB1O60287 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms