Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SLC28A2O43868 FEM1AP3-201ENST00000403722 1741 ntBASIC17.82■□□□□ 0.44
SLC28A2O43868 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.82■□□□□ 0.44
SLC28A2O43868 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC28A2O43868 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 FAAHP1-202ENST00000446499 1238 ntBASIC17.82■□□□□ 0.44
SLC28A2O43868 KRT17P6-201ENST00000453795 1220 ntBASIC17.82■□□□□ 0.44
SLC28A2O43868 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC28A2O43868 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A2O43868 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 AL441883.1-201ENST00000566170 1045 ntBASIC17.82■□□□□ 0.44
SLC28A2O43868 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A2O43868 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A2O43868 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A2O43868 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SLC28A2O43868 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A2O43868 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC28A2O43868 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC28A2O43868 CKBP1-201ENST00000565489 1086 ntBASIC17.81■□□□□ 0.44
SLC28A2O43868 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
SLC28A2O43868 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
SLC28A2O43868 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
SLC28A2O43868 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SLC28A2O43868 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SLC28A2O43868 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A2O43868 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC28A2O43868 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC28A2O43868 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC28A2O43868 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC28A2O43868 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A2O43868 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A2O43868 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A2O43868 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC28A2O43868 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SLC28A2O43868 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A2O43868 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 PRSS44-201ENST00000515154 1146 ntBASIC17.8■□□□□ 0.44
SLC28A2O43868 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC28A2O43868 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A2O43868 AC092119.3-201ENST00000612618 583 ntBASIC17.8■□□□□ 0.44
SLC28A2O43868 AC008622.2-201ENST00000617006 1229 ntBASIC17.8■□□□□ 0.44
SLC28A2O43868 AC011298.2-201ENST00000617989 482 ntBASIC17.8■□□□□ 0.44
SLC28A2O43868 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A2O43868 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A2O43868 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A2O43868 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC28A2O43868 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC28A2O43868 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A2O43868 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC28A2O43868 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC28A2O43868 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC28A2O43868 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC28A2O43868 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A2O43868 KRT18P38-201ENST00000449496 1282 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms