Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSH4O15457 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.72■□□□□ 0.91
MSH4O15457 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSH4O15457 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSH4O15457 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSH4O15457 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSH4O15457 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MSH4O15457 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSH4O15457 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MSH4O15457 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 AC073592.3-201ENST00000625118 1834 ntBASIC20.71■□□□□ 0.91
MSH4O15457 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.71■□□□□ 0.91
MSH4O15457 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.71■□□□□ 0.91
MSH4O15457 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.71■□□□□ 0.91
MSH4O15457 AC091076.1-201ENST00000610741 619 ntBASIC20.71■□□□□ 0.91
MSH4O15457 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MSH4O15457 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MSH4O15457 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.71■□□□□ 0.91
MSH4O15457 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.71■□□□□ 0.91
MSH4O15457 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSH4O15457 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.71■□□□□ 0.91
MSH4O15457 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.7■□□□□ 0.9
MSH4O15457 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MSH4O15457 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.7■□□□□ 0.9
MSH4O15457 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.7■□□□□ 0.9
MSH4O15457 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.7■□□□□ 0.9
MSH4O15457 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.7■□□□□ 0.9
MSH4O15457 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.7■□□□□ 0.9
MSH4O15457 AL024508.2-201ENST00000607749 1894 ntBASIC20.7■□□□□ 0.9
MSH4O15457 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSH4O15457 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
MSH4O15457 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MSH4O15457 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.69■□□□□ 0.9
MSH4O15457 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.69■□□□□ 0.9
MSH4O15457 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.69■□□□□ 0.9
MSH4O15457 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.69■□□□□ 0.9
MSH4O15457 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.69■□□□□ 0.9
MSH4O15457 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.69■□□□□ 0.9
MSH4O15457 RNF126P1-202ENST00000569893 925 ntBASIC20.69■□□□□ 0.9
MSH4O15457 AC024563.2-201ENST00000603282 481 ntBASIC20.69■□□□□ 0.9
MSH4O15457 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.69■□□□□ 0.9
MSH4O15457 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.69■□□□□ 0.9
MSH4O15457 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MSH4O15457 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.69■□□□□ 0.9
MSH4O15457 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSH4O15457 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.68■□□□□ 0.9
MSH4O15457 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSH4O15457 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MSH4O15457 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSH4O15457 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSH4O15457 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSH4O15457 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSH4O15457 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSH4O15457 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.68■□□□□ 0.9
MSH4O15457 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.68■□□□□ 0.9
MSH4O15457 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.68■□□□□ 0.9
MSH4O15457 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms