Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC25■■□□□ 1.59
SBNO1A3KN83 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC25■■□□□ 1.59
SBNO1A3KN83 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25■■□□□ 1.59
SBNO1A3KN83 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.99■■□□□ 1.59
SBNO1A3KN83 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.99■■□□□ 1.59
SBNO1A3KN83 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.99■■□□□ 1.59
SBNO1A3KN83 AL691403.2-201ENST00000618460 490 ntBASIC24.99■■□□□ 1.59
SBNO1A3KN83 CAND2-206ENST00000626378 333 ntTSL 5 BASIC24.99■■□□□ 1.59
SBNO1A3KN83 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SBNO1A3KN83 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SBNO1A3KN83 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
SBNO1A3KN83 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SBNO1A3KN83 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
SBNO1A3KN83 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SBNO1A3KN83 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SBNO1A3KN83 RPS2P28-201ENST00000314255 741 ntBASIC24.98■■□□□ 1.59
SBNO1A3KN83 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.98■■□□□ 1.59
SBNO1A3KN83 HMGN1P19-201ENST00000436976 333 ntBASIC24.98■■□□□ 1.59
SBNO1A3KN83 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.98■■□□□ 1.59
SBNO1A3KN83 AC027601.4-201ENST00000611259 610 ntBASIC24.98■■□□□ 1.59
SBNO1A3KN83 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SBNO1A3KN83 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SBNO1A3KN83 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.98■■□□□ 1.59
SBNO1A3KN83 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SBNO1A3KN83 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SBNO1A3KN83 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SBNO1A3KN83 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SBNO1A3KN83 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SBNO1A3KN83 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 AC034105.1-201ENST00000563488 319 ntBASIC24.97■■□□□ 1.59
SBNO1A3KN83 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 AC140113.2-201ENST00000604370 208 ntBASIC24.97■■□□□ 1.59
SBNO1A3KN83 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SBNO1A3KN83 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC24.97■■□□□ 1.59
SBNO1A3KN83 INTS4P1-201ENST00000438455 1935 ntBASIC24.97■■□□□ 1.59
SBNO1A3KN83 AC104109.2-201ENST00000602919 1418 ntBASIC24.96■■□□□ 1.59
SBNO1A3KN83 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 AL163051.1-201ENST00000569214 1512 ntBASIC24.96■■□□□ 1.59
SBNO1A3KN83 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
SBNO1A3KN83 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SBNO1A3KN83 UPF3AP3-201ENST00000420996 769 ntBASIC24.95■■□□□ 1.59
SBNO1A3KN83 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.95■■□□□ 1.59
SBNO1A3KN83 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
SBNO1A3KN83 AC021087.4-201ENST00000563761 564 ntBASIC24.95■■□□□ 1.59
SBNO1A3KN83 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.95■■□□□ 1.59
SBNO1A3KN83 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.95■■□□□ 1.59
SBNO1A3KN83 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC24.95■■□□□ 1.59
SBNO1A3KN83 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC24.95■■□□□ 1.59
SBNO1A3KN83 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SBNO1A3KN83 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SBNO1A3KN83 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SBNO1A3KN83 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.95■■□□□ 1.58
SBNO1A3KN83 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
SBNO1A3KN83 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SBNO1A3KN83 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SBNO1A3KN83 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SBNO1A3KN83 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SBNO1A3KN83 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SBNO1A3KN83 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SBNO1A3KN83 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SBNO1A3KN83 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.94■■□□□ 1.58
SBNO1A3KN83 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
SBNO1A3KN83 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SBNO1A3KN83 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC24.94■■□□□ 1.58
SBNO1A3KN83 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms