Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 AC010203.1-204ENST00000548782 407 ntBASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 AC073912.3-201ENST00000624414 853 ntBASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 AL096828.2-201ENST00000567259 1965 ntBASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV5S1A1TA0A578 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.27■□□□□ 0.67
TCRBV5S1A1TA0A578 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 MIR3917-201ENST00000580971 93 ntBASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV5S1A1TA0A578 AC073508.3-201ENST00000619697 1419 ntBASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 REXO1L9P-201ENST00000604264 2108 ntBASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV5S1A1TA0A578 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms