Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 MIR149-201ENST00000384879 89 ntBASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC005521.1-201ENST00000393351 872 ntBASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC140113.3-201ENST00000605663 199 ntBASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC010240.3-201ENST00000607688 395 ntBASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC196A0A1B0GTZ2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC009113.1-201ENST00000570267 2443 ntBASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 COX11P1-201ENST00000489116 835 ntBASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC009102.3-201ENST00000623118 1491 ntBASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC196A0A1B0GTZ2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC196A0A1B0GTZ2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC104581.1-202ENST00000635932 2618 ntBASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms