Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.59■□□□□ 0.89
GNEQ9Y223 MINOS1P3-201ENST00000457048 203 ntBASIC20.59■□□□□ 0.89
GNEQ9Y223 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.59■□□□□ 0.89
GNEQ9Y223 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.59■□□□□ 0.89
GNEQ9Y223 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.59■□□□□ 0.89
GNEQ9Y223 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 BX640515.1-201ENST00000617215 977 ntBASIC20.59■□□□□ 0.89
GNEQ9Y223 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.59■□□□□ 0.89
GNEQ9Y223 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.59■□□□□ 0.89
GNEQ9Y223 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GNEQ9Y223 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
GNEQ9Y223 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GNEQ9Y223 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.58■□□□□ 0.89
GNEQ9Y223 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.58■□□□□ 0.89
GNEQ9Y223 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GNEQ9Y223 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
GNEQ9Y223 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.58■□□□□ 0.89
GNEQ9Y223 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GNEQ9Y223 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
GNEQ9Y223 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GNEQ9Y223 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.58■□□□□ 0.89
GNEQ9Y223 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GNEQ9Y223 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
GNEQ9Y223 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.58■□□□□ 0.89
GNEQ9Y223 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.58■□□□□ 0.89
GNEQ9Y223 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.58■□□□□ 0.89
GNEQ9Y223 AL671883.3-201ENST00000603274 991 ntBASIC20.58■□□□□ 0.89
GNEQ9Y223 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
GNEQ9Y223 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.58■□□□□ 0.89
GNEQ9Y223 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
GNEQ9Y223 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GNEQ9Y223 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GNEQ9Y223 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
GNEQ9Y223 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GNEQ9Y223 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GNEQ9Y223 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.58■□□□□ 0.88
GNEQ9Y223 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GNEQ9Y223 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.57■□□□□ 0.88
GNEQ9Y223 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.57■□□□□ 0.88
GNEQ9Y223 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.57■□□□□ 0.88
GNEQ9Y223 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.57■□□□□ 0.88
GNEQ9Y223 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.57■□□□□ 0.88
GNEQ9Y223 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
GNEQ9Y223 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GNEQ9Y223 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GNEQ9Y223 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.57■□□□□ 0.88
GNEQ9Y223 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GNEQ9Y223 AC093484.2-201ENST00000580996 2166 ntBASIC20.57■□□□□ 0.88
GNEQ9Y223 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GNEQ9Y223 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.56■□□□□ 0.88
GNEQ9Y223 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GNEQ9Y223 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.56■□□□□ 0.88
GNEQ9Y223 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 MIR5100-201ENST00000579544 119 ntBASIC20.56■□□□□ 0.88
GNEQ9Y223 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.56■□□□□ 0.88
GNEQ9Y223 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GNEQ9Y223 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
GNEQ9Y223 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
GNEQ9Y223 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GNEQ9Y223 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
GNEQ9Y223 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GNEQ9Y223 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.55■□□□□ 0.88
GNEQ9Y223 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.55■□□□□ 0.88
GNEQ9Y223 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms