Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SIX4Q9UIU6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.77■□□□□ 0.75
SIX4Q9UIU6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 AL358472.4-201ENST00000633140 710 ntBASIC19.76■□□□□ 0.75
SIX4Q9UIU6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SIX4Q9UIU6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 MIR662-201ENST00000384847 95 ntBASIC19.75■□□□□ 0.75
SIX4Q9UIU6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX4Q9UIU6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 AL024508.2-201ENST00000607749 1894 ntBASIC19.74■□□□□ 0.75
SIX4Q9UIU6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 PCED1CP-201ENST00000419887 785 ntBASIC19.74■□□□□ 0.75
SIX4Q9UIU6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 AC116407.4-201ENST00000623319 1061 ntBASIC19.74■□□□□ 0.75
SIX4Q9UIU6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SIX4Q9UIU6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms