Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AC103702.1-201ENST00000548801 2630 ntBASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 MFSD11-216ENST00000590393 1141 ntBASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN2Q9UHD9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 UBALD1-205ENST00000590891 2641 ntBASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN2Q9UHD9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 AL121761.2-201ENST00000598007 1648 ntBASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 RARRES2P11-201ENST00000635158 484 ntBASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.62■□□□□ 0.09
UBQLN2Q9UHD9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN2Q9UHD9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN2Q9UHD9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms