Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.89■□□□□ 0.94
COL20A1Q9P218 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL20A1Q9P218 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL20A1Q9P218 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL20A1Q9P218 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL20A1Q9P218 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL20A1Q9P218 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL20A1Q9P218 AL353692.3-201ENST00000407031 1396 ntBASIC20.89■□□□□ 0.93
COL20A1Q9P218 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 UNC93B7-201ENST00000509439 705 ntBASIC20.89■□□□□ 0.93
COL20A1Q9P218 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.89■□□□□ 0.93
COL20A1Q9P218 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.89■□□□□ 0.93
COL20A1Q9P218 AC004263.2-201ENST00000617183 678 ntBASIC20.89■□□□□ 0.93
COL20A1Q9P218 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.89■□□□□ 0.93
COL20A1Q9P218 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL20A1Q9P218 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 AC112777.1-201ENST00000540175 1423 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 AL024508.2-201ENST00000607749 1894 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 ANO7L1-203ENST00000602586 1720 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.88■□□□□ 0.93
COL20A1Q9P218 AP000867.3-201ENST00000524675 377 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 PRELID1P1-202ENST00000567272 903 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 AC090616.6-201ENST00000582640 721 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 AL592071.1-201ENST00000611956 408 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 IGHV3-41-201ENST00000613121 348 ntBASIC20.88■□□□□ 0.93
COL20A1Q9P218 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL20A1Q9P218 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 AL845331.1-201ENST00000424978 1190 ntBASIC20.87■□□□□ 0.93
COL20A1Q9P218 AC091607.1-201ENST00000490318 1060 ntBASIC20.87■□□□□ 0.93
COL20A1Q9P218 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.87■□□□□ 0.93
COL20A1Q9P218 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL20A1Q9P218 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL20A1Q9P218 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL20A1Q9P218 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL20A1Q9P218 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 AP005901.3-202ENST00000581653 237 ntBASIC20.86■□□□□ 0.93
COL20A1Q9P218 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL20A1Q9P218 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL20A1Q9P218 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL20A1Q9P218 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.86■□□□□ 0.93
COL20A1Q9P218 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms