Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CALCOCO1Q9P1Z2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AP003071.4-201ENST00000562276 1284 ntBASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AL353708.3-201ENST00000610272 989 ntBASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AC097493.4-201ENST00000641197 219 ntBASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 SIRPAP1-201ENST00000448467 1770 ntBASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALCOCO1Q9P1Z2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 AL391005.1-201ENST00000623953 2435 ntBASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 CD177P1-201ENST00000606252 935 ntBASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 AC012306.2-201ENST00000609350 630 ntBASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALCOCO1Q9P1Z2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 AL353807.1-201ENST00000427475 662 ntBASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 AL355355.2-201ENST00000442321 338 ntBASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALCOCO1Q9P1Z2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CALCOCO1Q9P1Z2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALCOCO1Q9P1Z2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms