Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPAQ9P0L0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.53■□□□□ 0.4
VAPAQ9P0L0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPAQ9P0L0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 AL109659.2-201ENST00000606809 1674 ntBASIC17.52■□□□□ 0.4
VAPAQ9P0L0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 ESRRAP1-201ENST00000400596 1257 ntBASIC17.52■□□□□ 0.4
VAPAQ9P0L0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.52■□□□□ 0.4
VAPAQ9P0L0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VAPAQ9P0L0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
VAPAQ9P0L0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VAPAQ9P0L0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VAPAQ9P0L0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VAPAQ9P0L0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 KRT16P1-201ENST00000399124 1418 ntBASIC17.51■□□□□ 0.39
VAPAQ9P0L0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VAPAQ9P0L0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 AC026271.3-201ENST00000571884 352 ntBASIC17.5■□□□□ 0.39
VAPAQ9P0L0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 AC130371.2-201ENST00000619443 611 ntBASIC17.5■□□□□ 0.39
VAPAQ9P0L0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPAQ9P0L0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPAQ9P0L0 AC008622.2-201ENST00000617006 1229 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms