Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 PRSS44-201ENST00000515154 1146 ntBASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 AL390961.4-201ENST00000623958 2535 ntBASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 AC140113.3-201ENST00000605663 199 ntBASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 MYC-208ENST00000641036 567 ntBASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKIPSDQ9NZQ3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKIPSDQ9NZQ3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NCKIPSDQ9NZQ3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 AC083906.6-201ENST00000641366 219 ntBASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKIPSDQ9NZQ3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms