Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.85■□□□□ 0.61
UBP1Q9NZI7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 AC034236.2-201ENST00000606662 1610 ntBASIC18.85■□□□□ 0.61
UBP1Q9NZI7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 LINC01568-207ENST00000641790 1380 ntBASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 AC128688.1-201ENST00000487626 519 ntBASIC18.84■□□□□ 0.61
UBP1Q9NZI7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 MYLKP1-201ENST00000509077 1580 ntBASIC18.84■□□□□ 0.61
UBP1Q9NZI7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UBP1Q9NZI7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBP1Q9NZI7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 FAM87A-204ENST00000613235 858 ntBASIC18.83■□□□□ 0.6
UBP1Q9NZI7 AC010653.2-201ENST00000623505 997 ntBASIC18.83■□□□□ 0.6
UBP1Q9NZI7 MYC-208ENST00000641036 567 ntBASIC18.83■□□□□ 0.6
UBP1Q9NZI7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBP1Q9NZI7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms