Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 AC092597.1-201ENST00000487352 616 ntBASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 NTF6B-201ENST00000591913 560 ntBASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM248Q9NWD8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 MIR1224-201ENST00000408193 85 ntBASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 HLA-F-220ENST00000434407 884 ntBASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AL671277.2-201ENST00000458060 996 ntBASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AL136038.4-201ENST00000603606 1261 ntBASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AL391807.1-203ENST00000604392 2365 ntBASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AC010331.1-201ENST00000611423 582 ntBASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM248Q9NWD8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 HBZP1-201ENST00000354915 429 ntBASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms