Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 AL357033.4-201ENST00000617703 1807 ntBASIC17.27■□□□□ 0.36
RLIMQ9NVW2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 AP000692.2-201ENST00000608391 879 ntBASIC17.27■□□□□ 0.36
RLIMQ9NVW2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RLIMQ9NVW2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RLIMQ9NVW2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RLIMQ9NVW2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RLIMQ9NVW2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 AC113410.3-201ENST00000623366 203 ntBASIC17.26■□□□□ 0.35
RLIMQ9NVW2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 RCC2P3-201ENST00000418112 1537 ntBASIC17.26■□□□□ 0.35
RLIMQ9NVW2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RLIMQ9NVW2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 NUDT16P1-203ENST00000513809 620 ntBASIC17.25■□□□□ 0.35
RLIMQ9NVW2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 AC135776.1-201ENST00000319817 2481 ntBASIC17.25■□□□□ 0.35
RLIMQ9NVW2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RLIMQ9NVW2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 HCG11-201ENST00000411553 5696 ntBASIC17.24■□□□□ 0.35
RLIMQ9NVW2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms