Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 KRT18P21-201ENST00000515767 1272 ntBASIC19.73■□□□□ 0.75
CISHQ9NSE2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 MIR3180-4-201ENST00000582223 153 ntBASIC19.73■□□□□ 0.75
CISHQ9NSE2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.73■□□□□ 0.75
CISHQ9NSE2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CISHQ9NSE2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 TMPOP1-202ENST00000424642 1267 ntBASIC19.72■□□□□ 0.75
CISHQ9NSE2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 AC104076.2-201ENST00000448912 469 ntBASIC19.72■□□□□ 0.75
CISHQ9NSE2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.72■□□□□ 0.75
CISHQ9NSE2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CISHQ9NSE2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 MIR3917-201ENST00000580971 93 ntBASIC19.71■□□□□ 0.75
CISHQ9NSE2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms