Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SCAF1Q9H7N4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC27.53■■■□□ 2
SCAF1Q9H7N4 GXYLT1P6-201ENST00000456472 1187 ntBASIC27.53■■■□□ 2
SCAF1Q9H7N4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC27.53■■■□□ 2
SCAF1Q9H7N4 AL671883.3-201ENST00000603274 991 ntBASIC27.53■■■□□ 2
SCAF1Q9H7N4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SCAF1Q9H7N4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SCAF1Q9H7N4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SCAF1Q9H7N4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC27.53■■■□□ 2
SCAF1Q9H7N4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC27.53■■■□□ 2
SCAF1Q9H7N4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SCAF1Q9H7N4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 TREX1-205ENST00000625293 1783 ntBASIC27.52■■■□□ 2
SCAF1Q9H7N4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 AC117500.6-201ENST00000624871 588 ntBASIC27.52■■■□□ 2
SCAF1Q9H7N4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 AC124067.4-201ENST00000519691 2379 ntBASIC27.52■■■□□ 2
SCAF1Q9H7N4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 AC008894.3-201ENST00000624324 3103 ntBASIC27.52■■■□□ 2
SCAF1Q9H7N4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SCAF1Q9H7N4 KRT8P36-201ENST00000489121 1440 ntBASIC27.52■■■□□ 2
SCAF1Q9H7N4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC27.52■■■□□ 2
SCAF1Q9H7N4 RCC2P6-201ENST00000526625 1557 ntBASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 AL160237.2-201ENST00000556165 472 ntBASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 AC120114.3-201ENST00000611923 658 ntBASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF1Q9H7N4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 AC079781.3-201ENST00000449110 356 ntBASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 AC008040.2-201ENST00000461049 708 ntBASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF1Q9H7N4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 AC104692.2-201ENST00000603054 253 ntBASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 AC009948.4-201ENST00000604692 675 ntBASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF1Q9H7N4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 ARL4AP4-201ENST00000434170 518 ntBASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
SCAF1Q9H7N4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms