Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 ATP5C1P1-201ENST00000441945 895 ntBASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC092647.4-201ENST00000457211 535 ntBASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC108729.1-201ENST00000487812 947 ntBASIC20.56■□□□□ 0.88
RNF39Q9H2S5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC025175.1-201ENST00000606482 759 ntBASIC20.56■□□□□ 0.88
RNF39Q9H2S5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AP003072.5-201ENST00000623872 773 ntBASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 AL031432.5-201ENST00000641059 760 ntBASIC20.56■□□□□ 0.88
RNF39Q9H2S5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF39Q9H2S5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AL359075.1-203ENST00000462729 1002 ntBASIC20.55■□□□□ 0.88
RNF39Q9H2S5 RPL5P23-201ENST00000496040 868 ntBASIC20.55■□□□□ 0.88
RNF39Q9H2S5 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AC087888.1-201ENST00000550884 1254 ntBASIC20.55■□□□□ 0.88
RNF39Q9H2S5 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AL445222.1-201ENST00000607259 628 ntBASIC20.55■□□□□ 0.88
RNF39Q9H2S5 AL031667.3-201ENST00000620124 655 ntBASIC20.55■□□□□ 0.88
RNF39Q9H2S5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF39Q9H2S5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 MTND1P22-201ENST00000510572 951 ntBASIC20.54■□□□□ 0.88
RNF39Q9H2S5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 LINC01238-205ENST00000567549 1107 ntBASIC20.54■□□□□ 0.88
RNF39Q9H2S5 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 AC007423.1-201ENST00000605009 627 ntBASIC20.54■□□□□ 0.88
RNF39Q9H2S5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 AC133528.1-201ENST00000608316 805 ntBASIC20.54■□□□□ 0.88
RNF39Q9H2S5 AL358472.4-201ENST00000633140 710 ntBASIC20.54■□□□□ 0.88
RNF39Q9H2S5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 TAS2R1-201ENST00000382492 1359 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF39Q9H2S5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 MGST3-204ENST00000367888 778 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 AL023284.2-201ENST00000405850 579 ntBASIC20.53■□□□□ 0.88
RNF39Q9H2S5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms