Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 IRX1P1-201ENST00000438849 1838 ntBASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 AC005840.4-201ENST00000541242 2494 ntBASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 AL031602.1-201ENST00000633169 911 ntBASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 PKD1P1-201ENST00000458669 6805 ntBASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CYSTM1Q9H1C7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms