Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHANK2-AS3Q9BTD1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 ID1-201ENST00000376105 1233 ntBASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC130371.2-201ENST00000619443 611 ntBASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 CR392000.1-201ENST00000624770 1228 ntBASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
SHANK2-AS3Q9BTD1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AP000593.1-201ENST00000393668 712 ntBASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC008040.2-201ENST00000461049 708 ntBASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC006058.3-201ENST00000606217 1069 ntBASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC138028.4-201ENST00000564984 1845 ntBASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHANK2-AS3Q9BTD1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms