Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.9□□□□□ -0.34
UPK3BQ9BT76 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UPK3BQ9BT76 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UPK3BQ9BT76 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UPK3BQ9BT76 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
UPK3BQ9BT76 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.9□□□□□ -0.35
UPK3BQ9BT76 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 AL023284.2-201ENST00000405850 579 ntBASIC12.89□□□□□ -0.35
UPK3BQ9BT76 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 AC092647.4-201ENST00000457211 535 ntBASIC12.89□□□□□ -0.35
UPK3BQ9BT76 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 MIR3180-5-201ENST00000583743 153 ntBASIC12.89□□□□□ -0.35
UPK3BQ9BT76 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 CR769767.2-201ENST00000622735 460 ntBASIC12.89□□□□□ -0.35
UPK3BQ9BT76 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 FP475955.4-201ENST00000623131 1990 ntBASIC12.89□□□□□ -0.35
UPK3BQ9BT76 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK3BQ9BT76 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.88□□□□□ -0.35
UPK3BQ9BT76 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 NFIC-211ENST00000641145 8399 ntBASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 AC009947.2-201ENST00000444014 672 ntBASIC12.88□□□□□ -0.35
UPK3BQ9BT76 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 GPAT2P1-201ENST00000444924 1672 ntBASIC12.88□□□□□ -0.35
UPK3BQ9BT76 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms