Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB18PQ96TA0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 CCR12P-201ENST00000446203 998 ntBASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 BX088651.1-201ENST00000540551 451 ntBASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 SDHAP2-201ENST00000455183 2001 ntBASIC19.63■□□□□ 0.73
PCDHB18PQ96TA0 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 AC068880.1-201ENST00000507289 2297 ntBASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB18PQ96TA0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 AL163051.1-201ENST00000569214 1512 ntBASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 AC005332.8-201ENST00000622750 2735 ntBASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 HOXB1-202ENST00000577092 1414 ntBASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 KRT18P23-201ENST00000435622 1283 ntBASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 EGLN1P1-201ENST00000531623 762 ntBASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB18PQ96TA0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB18PQ96TA0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms