Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 AL359075.1-203ENST00000462729 1002 ntBASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD1Q96NR3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 SEC1P-202ENST00000473944 940 ntBASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD1Q96NR3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 AC034232.1-201ENST00000506026 1064 ntBASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 KRT18P35-201ENST00000510488 1269 ntBASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD1Q96NR3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD1Q96NR3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms