Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 PP12613-201ENST00000424958 2230 ntBASIC14.14□□□□□ -0.15
LINC00479Q96M42 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AC092368.3-202ENST00000574180 1591 ntBASIC14.14□□□□□ -0.15
LINC00479Q96M42 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AL357033.4-201ENST00000617703 1807 ntBASIC14.14□□□□□ -0.15
LINC00479Q96M42 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 RARRES2P6-201ENST00000567333 442 ntBASIC14.14□□□□□ -0.15
LINC00479Q96M42 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AL050303.2-201ENST00000619798 666 ntBASIC14.14□□□□□ -0.15
LINC00479Q96M42 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00479Q96M42 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00479Q96M42 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 MIPEPP3-201ENST00000412105 444 ntBASIC14.13□□□□□ -0.15
LINC00479Q96M42 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.13□□□□□ -0.15
LINC00479Q96M42 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 AL121829.2-201ENST00000620908 328 ntBASIC14.13□□□□□ -0.15
LINC00479Q96M42 MYC-208ENST00000641036 567 ntBASIC14.13□□□□□ -0.15
LINC00479Q96M42 AC124067.4-201ENST00000519691 2379 ntBASIC14.13□□□□□ -0.15
LINC00479Q96M42 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 AC112777.1-201ENST00000540175 1423 ntBASIC14.13□□□□□ -0.15
LINC00479Q96M42 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LINC00479Q96M42 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms