Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.23■□□□□ 0.35
CT55Q8WUE5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CT55Q8WUE5 AP005901.3-202ENST00000581653 237 ntBASIC17.23■□□□□ 0.35
CT55Q8WUE5 AC004263.2-201ENST00000617183 678 ntBASIC17.23■□□□□ 0.35
CT55Q8WUE5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 AL161938.1-201ENST00000569833 2180 ntBASIC17.23■□□□□ 0.35
CT55Q8WUE5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CT55Q8WUE5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 NUS1P2-201ENST00000417358 873 ntBASIC17.22■□□□□ 0.35
CT55Q8WUE5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 AL353801.3-201ENST00000609898 542 ntBASIC17.22■□□□□ 0.35
CT55Q8WUE5 AC083906.6-201ENST00000641366 219 ntBASIC17.22■□□□□ 0.35
CT55Q8WUE5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CT55Q8WUE5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.22■□□□□ 0.35
CT55Q8WUE5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 KRT16P4-201ENST00000453883 522 ntBASIC17.21■□□□□ 0.35
CT55Q8WUE5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 AC011840.4-201ENST00000578471 627 ntBASIC17.21■□□□□ 0.35
CT55Q8WUE5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CT55Q8WUE5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CT55Q8WUE5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CT55Q8WUE5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CT55Q8WUE5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
CT55Q8WUE5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CT55Q8WUE5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.2■□□□□ 0.34
CT55Q8WUE5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CT55Q8WUE5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CT55Q8WUE5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.2■□□□□ 0.34
CT55Q8WUE5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CT55Q8WUE5 MIR149-201ENST00000384879 89 ntBASIC17.2■□□□□ 0.34
CT55Q8WUE5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.2■□□□□ 0.34
CT55Q8WUE5 AP000347.1-202ENST00000435868 847 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms