Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 AL358472.4-201ENST00000633140 710 ntBASIC18.67■□□□□ 0.58
CHD5Q8TDI0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD5Q8TDI0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 MIR3180-1-201ENST00000580374 94 ntBASIC18.66■□□□□ 0.58
CHD5Q8TDI0 MIR3180-3-201ENST00000584616 94 ntBASIC18.66■□□□□ 0.58
CHD5Q8TDI0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD5Q8TDI0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 AC087388.1-201ENST00000571370 1112 ntBASIC18.65■□□□□ 0.58
CHD5Q8TDI0 AL590326.2-201ENST00000625139 305 ntBASIC18.65■□□□□ 0.58
CHD5Q8TDI0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD5Q8TDI0 ARMC10P1-201ENST00000313754 855 ntBASIC18.64■□□□□ 0.58
CHD5Q8TDI0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD5Q8TDI0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.64■□□□□ 0.57
CHD5Q8TDI0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD5Q8TDI0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms