Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 NOC2LP1-202ENST00000452600 2235 ntBASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SMARCC2Q8TAQ2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 ABALON-201ENST00000629058 1903 ntBASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 MYLKP1-201ENST00000509077 1580 ntBASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 AL512604.3-201ENST00000569583 964 ntBASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC2Q8TAQ2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 MCCD1P1-208ENST00000445732 328 ntBASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 AC010331.1-201ENST00000611423 582 ntBASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 AL138966.2-201ENST00000621997 464 ntBASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC2Q8TAQ2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC2Q8TAQ2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SMARCC2Q8TAQ2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SMARCC2Q8TAQ2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SMARCC2Q8TAQ2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SMARCC2Q8TAQ2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
SMARCC2Q8TAQ2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 BX664615.1-201ENST00000443558 458 ntBASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC2Q8TAQ2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms