Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.84■□□□□ 0.77
LMO3Q8TAP4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 NEK4P2-201ENST00000580004 1012 ntBASIC19.84■□□□□ 0.77
LMO3Q8TAP4 MIR3180-4-201ENST00000582223 153 ntBASIC19.84■□□□□ 0.77
LMO3Q8TAP4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.84■□□□□ 0.77
LMO3Q8TAP4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 AC010240.3-201ENST00000607688 395 ntBASIC19.83■□□□□ 0.77
LMO3Q8TAP4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 AC073912.3-201ENST00000624414 853 ntBASIC19.83■□□□□ 0.77
LMO3Q8TAP4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LMO3Q8TAP4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMO3Q8TAP4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.83■□□□□ 0.76
LMO3Q8TAP4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.83■□□□□ 0.76
LMO3Q8TAP4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.83■□□□□ 0.76
LMO3Q8TAP4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AC010203.1-204ENST00000548782 407 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AL512604.3-201ENST00000569583 964 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AC024243.1-201ENST00000609234 778 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AC141257.4-201ENST00000634557 245 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AC136944.6-201ENST00000634818 245 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 PHGDH-209ENST00000641074 1780 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.82■□□□□ 0.76
LMO3Q8TAP4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO3Q8TAP4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 LINC01126-201ENST00000623515 1646 ntBASIC19.81■□□□□ 0.76
LMO3Q8TAP4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.81■□□□□ 0.76
LMO3Q8TAP4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms