Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 HLA-A-201ENST00000376802 1334 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 MTMR9LP-203ENST00000426597 1545 ntBASIC14.38□□□□□ -0.11
LINC01006Q8NI28 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 AC064862.7-201ENST00000604520 867 ntBASIC14.38□□□□□ -0.11
LINC01006Q8NI28 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01006Q8NI28 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01006Q8NI28 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 AC008687.5-201ENST00000593746 558 ntBASIC14.36□□□□□ -0.11
LINC01006Q8NI28 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms