Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 PCED1CP-201ENST00000419887 785 ntBASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 CROCCP3-202ENST00000420820 1947 ntBASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 AC112907.2-201ENST00000448639 330 ntBASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 GPAT2P1-201ENST00000444924 1672 ntBASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDND2Q8NHS1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC018470.1-201ENST00000624790 3129 ntBASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 STARP1-201ENST00000397973 869 ntBASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC104581.1-202ENST00000635932 2618 ntBASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 IER3-202ENST00000376377 1350 ntBASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms