Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 AL390961.4-201ENST00000623958 2535 ntBASIC17.34■□□□□ 0.37
NUP43Q8NFH3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.33■□□□□ 0.37
NUP43Q8NFH3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 TSPY14P-201ENST00000303979 915 ntBASIC17.33■□□□□ 0.36
NUP43Q8NFH3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP43Q8NFH3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 MMP23A-201ENST00000234610 1017 ntBASIC17.32■□□□□ 0.36
NUP43Q8NFH3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 AL596275.1-201ENST00000423464 877 ntBASIC17.32■□□□□ 0.36
NUP43Q8NFH3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 EGLN1P1-201ENST00000531623 762 ntBASIC17.32■□□□□ 0.36
NUP43Q8NFH3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CR769767.2-201ENST00000622735 460 ntBASIC17.32■□□□□ 0.36
NUP43Q8NFH3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 AC007613.1-201ENST00000572811 2597 ntBASIC17.32■□□□□ 0.36
NUP43Q8NFH3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NUP43Q8NFH3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.31■□□□□ 0.36
NUP43Q8NFH3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 KRT8P9-201ENST00000558927 1449 ntBASIC17.31■□□□□ 0.36
NUP43Q8NFH3 KRT8P50-201ENST00000562022 1438 ntBASIC17.31■□□□□ 0.36
NUP43Q8NFH3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 AL354751.1-201ENST00000412768 1863 ntBASIC17.31■□□□□ 0.36
NUP43Q8NFH3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 NAPSB-206ENST00000562112 1266 ntBASIC17.31■□□□□ 0.36
NUP43Q8NFH3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 AC010653.2-201ENST00000623505 997 ntBASIC17.31■□□□□ 0.36
NUP43Q8NFH3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
NUP43Q8NFH3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms